Fitness data for PP_5340 in Pseudomonas putida KT2440

Acetylpolyamine aminohydrolase
SEED: Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Glucose (C) (20mM) -0.6 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.2 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -2.3 compare
pH Growth at pH7 and (C) Trisodium citrate -0.5 -1.5 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.9 compare
temperature Growth at 30C; with MOPS -0.4 -1.7 compare
nitrogen source Hippuric (N) -0.4 -2.4 compare
pH D-Glucose (C) pH 7.5 -0.4 -2.3 compare
stress Growth with Chloride 200 mM -0.4 -1.5 compare
nitrogen source Urea (N); with MOPS -0.4 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.2 compare
temperature shift Temperature shift 30_to_10 +0.4 +2.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.4 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.4 +1.9 compare
pH Growth at pH7 and (C) D-Glucose +0.4 +2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.0 compare
carbon source carbon source Bisabolene 48.9 mM +0.5 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +1.9 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.6 +2.3 compare