Fitness data for PP_5315 in Pseudomonas putida KT2440

Rubredoxin-1
SEED: Rubredoxin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -3.0 compare
nitrogen source D-2-Aminobutyric (N) -1.4 -1.5 compare
pH D-Glucose (C) pH 6.5 -1.2 -2.0 compare
carbon source Quinic Acid (C) -1.1 -3.2 compare
carbon source D-Glucaric (C) -1.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -1.7 compare
stress R2A with Fusaric 240 ug/mL -1.1 -2.0 compare
carbon source ferulate (C); with MOPS -1.1 -1.6 compare
phage P. putida Sci Big MOI 0.1 -1.0 -1.8 compare
nitrogen source NAG (N); with MOPS -1.0 -1.2 compare
nitrogen source Urea (N) -1.0 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0 -2.6 compare
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.9 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +3.2 compare
nitrogen source Ammonium chloride (N) +1.0 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +1.1 +2.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +1.2 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.5 compare