Fitness data for PP_5248 in Pseudomonas putida KT2440

putative hydrolase
SEED: Nicotinamidase family protein YcaC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
stress Growth with Chloride 500 mM; with MOPS -3.7 -1.4 compare
no stress control Growth with no stress -3.5 -1.2 compare
pH Growth at pH7 and (C) Trisodium citrate -3.5 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.4 -1.1 compare
pH Growth at pH6 and (C) Trisodium citrate -3.4 -1.2 compare
carbon source 1,3-Butandiol (C) -3.4 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.5 -1.3 compare
nitrogen source nitrate (N) -2.5 -1.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM -2.3 -1.0 compare
pH Growth at pH6 and (C) D-Glucose -2.3 -1.1 compare
carbon source 1,4-Butanediol (C) -2.2 -2.2 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -2.2 -1.2 compare
pH pH 4 -2.1 -1.2 compare
carbon source Sebacic (C) -2.1 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.1 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -1.2 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -2.1 -1.3 compare
carbon source carbon source D-Glucose 55.5 mM -2.1 -1.1 compare
temperature shift Temperature shift 10_to_25 -2.0 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +4.7 +4.4 compare