Fitness data for PP_5210 in Pseudomonas putida KT2440

Alcohol dehydrogenase, zinc-containing
SEED: Quinone oxidoreductase (EC 1.6.5.5)
KEGG: NADPH2:quinone reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 4-Hydroxyvalerate (C) (40mM) -2.6 -10.2 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -2.2 -8.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.9 compare
temperature Growth at 30C; with MOPS -0.4 -1.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.4 -1.8 compare
pH Growth at pH8 and (C) D-Glucose -0.4 -1.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -1.6 compare
carbon source butyrate (C) -0.4 -1.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.4 -1.9 compare
nitrogen source nitrate (N) -0.4 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.6 compare
pH pH 8 +0.4 +1.7 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5 +2.3 compare
carbon source Delta-Decalactone (C) +0.5 +2.9 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.5 +2.3 compare
carbon source Delta-Nonalactone (C) +0.7 +4.2 compare