Fitness data for PP_5205 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG006231: RNA-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0 -2.5 compare
pH pH 8 -0.9 -2.8 compare
carbon source 3-methyl-1-butanol (C) -0.8 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.0 compare
nitrogen source Ammonium chloride (N) -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.9 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.0 compare
nitrogen source Butyrolactam (N) -0.5 -2.8 compare
stress R2A with Fusaric 120 ug/mL -0.5 -2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +1.9 compare
carbon source rac-3-Hydroxypentanoic Acid (C) +0.5 +2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM +0.5 +1.9 compare
nitrogen source nitrite (N) +0.5 +2.1 compare
carbon source Tween 20 (C) +0.5 +2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.3 compare
carbon source DL-3-Hydroxybutyric (C) +0.6 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.8 compare