Fitness data for PP_5188 in Pseudomonas putida KT2440

putative transcriptional regulator (AsnC/Lrp family)
SEED: Transcriptional regulator, AsnC family
KEGG: Lrp/AsnC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -4.2 -5.4 compare
nitrogen source L-Valine (N) -3.2 -6.9 compare
nitrogen source L-Valine (N) -3.1 -7.2 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -3.0 -6.3 compare
carbon source L-Valine (C) -2.6 -7.3 compare
carbon source L-Valine (C) -2.5 -6.8 compare
carbon source L-Valine (C) -1.9 -5.6 compare
carbon source ferulate (C); with MOPS -1.0 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -2.6 compare
temperature Growth at 30C; with MOPS -0.9 -2.1 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -1.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.7 -2.3 compare
carbon source L-Leucine (C) -0.7 -2.6 compare
pH pH 8 -0.6 -1.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.4 compare
stress Growth with Chloride 500 mM; with MOPS +0.7 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.7 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
carbon source ferulate (C); with MOPS +0.7 +2.5 compare