Fitness data for PP_5138 in Pseudomonas putida KT2440

putative transcriptional regulator LysR family
SEED: Transcriptional regulators, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -0.8 -2.8 compare
carbon source Hexanoic (C) -0.5 -3.1 compare
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.5 -3.4 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.5 -2.6 compare
pH Valerolactone (C) pH 6.5 -0.5 -1.8 compare
stress Growth with Chloride 200 mM -0.5 -2.1 compare
nitrogen source nitrogen source nitrite 1mM +0.4 +2.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.5 compare
carbon source carbon source Glycerol 108.6 mM +0.4 +1.8 compare
nitrogen source nitrite (N) +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.5 compare
carbon source L-Leucine (C) +0.4 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +2.6 compare
nitrogen source nitrate (N) +0.5 +2.3 compare
temperature Growth at 25C +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.8 compare