Fitness data for PP_5068 in Pseudomonas putida KT2440

conserved protein of unknown function, UPF0061 family
SEED: Selenoprotein O and cysteine-containing homologs

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Delta-Nonalactone (C) -0.8 -3.5 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -2.1 compare
stress pinene 10 vol% -0.5 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.0 compare
carbon source DL-3-Hydroxybutyric (C) +0.4 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +2.0 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.9 compare
nitrogen source Propiolactam (N) +0.5 +2.4 compare
nitrogen source Urea (N) +0.5 +2.4 compare
pH Valerolactone (C) pH 6.5 +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.8 compare
carbon source L-Phenylalanine 5 mM (C) +0.5 +3.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.5 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +3.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.2 compare