Fitness data for PP_5067 in Pseudomonas putida KT2440

mechanosensitive channel protein, intermediate (smaller, MscS-like) conductance, K+ efflux
KEGG: potassium efflux system protein KefA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.7 -4.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -3.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -4.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -3.6 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C -0.5 -3.9 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C -0.3 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -2.2 compare
pH pH 6 -0.3 -1.5 compare
carbon source Glucose (C) (20mM) +0.3 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.9 compare
carbon source D-Glucose (C) +0.3 +1.6 compare
carbon source ferulate (C); with MOPS +0.3 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +1.9 compare
carbon source D-Glucose (C) +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
carbon source D-Glucose (C); with MOPS +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare