Fitness data for PP_5061 in Pseudomonas putida KT2440

Choline transporter
SEED: High-affinity choline uptake protein BetT
KEGG: high-affinity choline transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
pH Valerolactone (C) pH 6.5 -0.8 -4.1 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.6 compare
pH pH 9 -0.5 -2.5 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.5 -2.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.5 -2.5 compare
carbon source carbon source D-Glucose 55.5 mM -0.4 -2.1 compare
pH pH 5 -0.4 -2.0 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.4 -2.0 compare
carbon source Hexanoic (C) -0.3 -2.4 compare
nitrogen source Urea (N) +0.3 +1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.7 compare
temperature shift Temperature shift 30_to_10 +0.3 +2.4 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.9 compare
carbon source L-Phenylalanine 5 mM (C) +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +2.1 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5 +2.5 compare