Fitness data for PP_5033 in Pseudomonas putida KT2440

Urocanate hydratase
SEED: Urocanate hydratase (EC 4.2.1.49)
KEGG: urocanate hydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Histidine (C) -5.6 -16.6 compare
nitrogen source L-Histidine (N) -0.7 -5.9 compare
nitrogen source L-Histidine (N) -0.7 -5.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.1 compare
pH pH 7 -0.4 -2.0 compare
carbon source Valeric (C) -0.4 -1.7 compare
stress Growth with Chloride 500 mM -0.4 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +1.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.4 +2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.4 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.3 compare
nitrogen source Ammonium chloride and TNT (N) +0.4 +3.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +2.5 compare
phage P. putida Missley MOI 0.1 +0.5 +2.6 compare
phage P. putida PUT 7 MOI 1 +0.5 +2.6 compare
nitrogen source L-Threonine (N) +1.3 +5.8 compare
nitrogen source L-Threonine (N) +1.3 +6.1 compare