Fitness data for PP_4972 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: probable membrane protein NMA1176

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -0.5 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
phage P. putida Missley MOI 0.1 -0.4 -2.1 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.3 -1.2 compare
carbon source 4-Aminobutyric 10 mM (C) +0.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.9 compare
temperature shift Temperature shift 30_to_10 +0.4 +2.5 compare
pH pH 4 +0.4 +1.9 compare
carbon source acetate (C) +0.4 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +2.8 compare
pH Growth at pH9 and (C) Trisodium citrate +0.4 +2.5 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.5 compare
carbon source ferulate (C); with MOPS +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare