Fitness data for PP_4950 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.7 -2.1 compare
phage PUT 8 MOI 1 -0.5 -1.9 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.5 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.8 compare
carbon source Delta-Decalactone (C) -0.4 -2.4 compare
carbon source Crotonic (C) -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
carbon source 2,3-Butanediol (C) +0.4 +2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.4 +1.7 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.4 +1.7 compare
pH Growth at pH8 and (C) Trisodium citrate +0.4 +1.8 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.4 +2.0 compare
nitrogen source Urea (N) +0.4 +1.8 compare
toxin pUC18_phdP1_pSU18T_docP1 +0.4 +2.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.1 compare
temperature Growth at 30C; with MOPS +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.6 compare
nitrogen source NAG (N); with MOPS +0.6 +2.5 compare