Fitness data for PP_4927 in Pseudomonas putida KT2440

Cyclolysin secretion/processing ATP-binding protein CyaB
SEED: cyclolysin secretion ATP-binding protein
KEGG: ATP-binding cassette, subfamily B, bacterial HlyB/CyaB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -0.3 -1.7 compare
phage P. putida Sci Big MOI 0.1 -0.3 -1.8 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.3 -1.8 compare
carbon source BC Lignin Sorghum 10 vol% (C) +0.3 +2.5 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.3 +1.9 compare
carbon source butyrate (C) +0.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.3 +1.7 compare
carbon source 2,3-Butanediol (C) +0.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.1 compare
nitrogen source Urea (N) +0.4 +2.2 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.3 compare
carbon source Myristic (C) +0.4 +2.3 compare
carbon source Delta-Decalactone (C) +0.4 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.6 compare
carbon source Valerolactone (C) +0.5 +3.3 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +3.5 compare