Fitness data for PP_4920 in Pseudomonas putida KT2440

putative Lipoprotein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.0 -2.4 compare
carbon source acetate (C) -0.7 -2.3 compare
pH Growth at pH7 and (C) Trisodium citrate -0.7 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.9 compare
carbon source Tween 20 (C) -0.6 -1.9 compare
carbon source 4-Aminobutyric 10 mM (C) -0.5 -2.2 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.0 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +2.6 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +2.6 compare
carbon source Trisodium citrate 10 mM (C) +0.5 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.1 compare
carbon source Delta-Nonalactone (C) +0.6 +2.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6 +2.7 compare
carbon source ferulate (C); with MOPS +0.6 +2.2 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare