Fitness data for PP_4902 in Pseudomonas putida KT2440

Oligoribonuclease
SEED: 3'-to-5' oligoribonuclease (orn)
KEGG: oligoribonuclease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 4.9)


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group condition fitness t score  
stress R2A with Fusaric 480 ug/mL -7.6 -5.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -6.2 -6.0 compare
micoeukaryotes C.elegans, mixed culture-2 -5.9 -5.8 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -5.8 -5.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -5.8 -4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.7 -3.2 compare
nitrogen source nitrogen source nitrite 0.5mM -5.6 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.5 -3.8 compare
stress R2A with Fusaric 480 ug/mL -5.4 -5.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.3 -3.7 compare
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -5.3 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.2 -3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -5.1 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -5.0 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -5.0 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -5.0 -3.5 compare
phage P. put South MOI 10 -4.9 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -4.9 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -4.9 -5.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.9 -2.6 compare