Fitness data for PP_4887 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00956082: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.1 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.7 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.7 -1.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.7 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.0 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.2 compare
carbon source L-Leucine (C) -0.6 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.6 compare
carbon source Ethyl decanoate and D-Glucose (C)s -0.6 -2.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.5 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +2.1 compare
no stress control Growth with no stress +0.6 +2.1 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +1.7 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.6 +2.4 compare
temperature shift Temperature shift 30_to_4; with MOPS +0.7 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.4 compare