Fitness data for PP_4885 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: hypothetical protein Pfl_5213

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source acetate (C) -0.6 -2.4 compare
carbon source Nonanoic (C) -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.5 compare
nitrogen source Propiolactam (N) -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.2 compare
nitrogen source Urea (N) +0.3 +1.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.3 +1.5 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.3 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3 +2.1 compare
pH pH 9 +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.9 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.3 +1.8 compare
carbon source 2,3-Butanediol (C) +0.3 +2.2 compare
carbon source Ethyl decanoate (C) +0.3 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.0 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.4 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +4.3 compare