Fitness data for PP_4880 in Pseudomonas putida KT2440

exoribonuclease R
SEED: 3'-to-5' exoribonuclease RNase R
KEGG: ribonuclease R

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.7)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-1 -3.7 -16.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.4 -6.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.3 -9.4 compare
temperature Growth at 10C -3.2 -9.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -3.1 -10.5 compare
temperature Growth at 10C -3.1 -9.6 compare
temperature Growth at 10C -3.1 -9.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.1 -9.8 compare
temperature Growth at 10C; with MOPS -3.1 -9.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.0 -11.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.0 -10.9 compare
micoeukaryotes C.elegans, mixed culture-2 -3.0 -12.2 compare
temperature Growth at 10C; with MOPS -3.0 -8.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.9 -12.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.9 -6.1 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -2.8 -12.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.8 -9.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.8 -10.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.7 -9.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.7 -12.6 compare