Fitness data for PP_4841 in Pseudomonas putida KT2440

putative Urea ABC transporter, periplasmic protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -0.8 -3.2 compare
nitrogen source Propandiamine (N) -0.8 -3.6 compare
phage P. putida Sci small MOI 0.1 -0.7 -2.4 compare
phage P. putida Sci Big MOI 0.1 -0.7 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.5 compare
nitrogen source Propiolactam (N) -0.5 -2.4 compare
carbon source ferulate (C); with MOPS -0.4 -1.5 compare
nitrogen source 6-aminocaproic (N) -0.4 -2.6 compare
no stress control Growth with no stress -0.4 -1.4 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -1.6 compare
nitrogen source Ammonium chloride (N) -0.4 -1.7 compare
carbon source carbon source Glycerol 108.6 mM +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.6 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.3 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +2.9 compare