Fitness data for PP_4811 in Pseudomonas putida KT2440

Gamma-glutamyl phosphate reductase
SEED: Gamma-glutamyl phosphate reductase (EC 1.2.1.41)
KEGG: glutamate-5-semialdehyde dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
carbon source 3-methyl-1-butanol (C) -2.2 -5.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.2 -4.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.1 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.0 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -4.3 compare
nitrogen source nitrate (N) -1.7 -2.4 compare
carbon source Delta-Decalactone (C) -1.6 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.6 -3.3 compare
temperature Growth at 30C; with MOPS -1.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.5 -3.1 compare
micoeukaryotes C.elegans, mixed culture-1 -1.5 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.5 -2.6 compare
carbon source D-Glucose (C) -1.4 -2.2 compare
carbon source 3-methyl-1-butanol (C) -1.4 -6.0 compare
stress Geraniol 1 vol% -1.3 -4.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -3.4 compare
nitrogen source DL-2-Aminobutyric (N) +1.4 +4.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.7 +4.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +2.1 +4.2 compare