Fitness data for PP_4775 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00954854: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.7 -2.7 compare
carbon source ferulate (C); with MOPS -0.4 -1.8 compare
no stress control Growth with no stress -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.3 compare
carbon source Trisodium citrate (C) -0.3 -1.6 compare
pH Growth at pH9 and (C) Trisodium citrate -0.3 -1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.3 -1.9 compare
nitrogen source no extra (N); with MOPS -0.3 -1.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.3 -2.1 compare
carbon source Crotonic (C) -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -1.3 compare
carbon source Levulinic Acid (C) +0.3 +2.2 compare
carbon source Vanillin (C) +0.3 +2.3 compare
nitrogen source Ammonium chloride (N) +0.3 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.5 compare
carbon source 2-Methylbutanoic (C) +0.4 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
carbon source D-Glucose (C) +0.4 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +2.3 compare