Fitness data for PP_4773 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -1.1 -1.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.9 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -2.1 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.8 -1.5 compare
pH Valerolactone (C) pH 6.5 -0.7 -2.1 compare
carbon source ferulate (C); with MOPS -0.7 -1.2 compare
carbon source Sebacic (C) -0.7 -3.0 compare
carbon source D-Glucose (C) -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.7 compare
nitrogen source nitrogen source nitrite 1mM -0.6 -1.7 compare
carbon source carbon source Bisabolene 48.9 mM -0.6 -1.5 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.6 -1.6 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.6 -1.9 compare
carbon source ferulate (C); with MOPS +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.4 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +1.9 compare