Fitness data for PP_4771 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: FIG00958173: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Valerolactone (C) -1.1 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.1 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0 -2.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.9 -2.0 compare
phage P. putida Sci Big MOI 0.1 -0.9 -1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.8 -1.9 compare
nitrogen source no extra (N); with MOPS -0.8 -2.4 compare
nitrogen source Urea (N) -0.8 -1.6 compare
nitrogen source NAG (N); with MOPS -0.8 -1.2 compare
temperature shift Temperature shift 30_to_25 -0.8 -1.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -1.5 compare
toxin pUC18_phdP1_pSU18T_docP1 -0.8 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.9 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.0 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.4 +2.1 compare