Fitness data for PP_4770 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein conserved in bacteria
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.9 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.5 compare
stress Isobutyl alcohol 0.6 vol% -0.7 -4.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -1.9 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.6 -2.9 compare
nitrogen source nitrogen source nitrate 20mM -0.5 -2.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.4 compare
carbon source D-Lysine 10 mM (C) -0.5 -2.1 compare
carbon source DL-2-Aminoadipic 10 mM (C) -0.5 -2.8 compare
nitrogen source nitrogen source nitrate 5mM -0.5 -1.6 compare
carbon source Delta-Nonalactone (C) -0.5 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.2 compare
temperature Growth at 25C; with MOPS +0.5 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.1 compare
carbon source carbon source D-Glucose 55.5 mM +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.4 compare