Fitness data for PP_4765 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: NAD(FAD)-utilizing dehydrogenases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -5.0 compare
nitrogen source DL-2-Aminobutyric (N) -0.8 -5.5 compare
nitrogen source DL-2-Aminobutyric (N) -0.7 -5.0 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -3.0 compare
nitrogen source nitrate (N) -0.6 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.4 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.4 -1.8 compare
phage P. putida compost MOI 0.1 -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM +0.4 +2.4 compare
pH Valerolactone (C) pH 6.5 +0.4 +2.2 compare
carbon source D-Glucose (C) +0.4 +2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +2.4 compare
carbon source Tween 20 (C) +0.5 +2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.4 compare