Fitness data for PP_4757 in Pseudomonas putida KT2440

D-glucarate dehydratase / L-idarate epimerase
SEED: Glucarate dehydratase (EC 4.2.1.40)
KEGG: glucarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Glucuronic gamma lactone (C) -6.2 -6.1 compare
carbon source D-Glucuronic gamma lactone (C) -5.3 -8.2 compare
carbon source D-Glucaric (C) -5.1 -8.6 compare
carbon source D-Glucaric (C) -5.0 -7.7 compare
carbon source D-Glucuronic Acid (C) -3.1 -9.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.8 -2.5 compare
carbon source Mucic (C) -0.8 -3.7 compare
phage P. putida South MOI 10 -0.8 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.9 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.2 compare
nitrogen source NAG (N); with MOPS -0.7 -1.2 compare
carbon source butyrate (C) -0.7 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.7 -2.3 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.6 compare
pH pH 8 -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.8 +3.3 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +2.0 compare