Fitness data for PP_4756 in Pseudomonas putida KT2440

gamma-aminobutyrate permease
SEED: Gamma-aminobutyrate permease
KEGG: amino acid transporter, AAT family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
temperature shift Temperature shift 30_to_21; with MOPS -0.5 -2.1 compare
nitrogen source nitrate (N) -0.4 -2.3 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.5 compare
pH Growth at pH7 and (C) Trisodium citrate -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.8 compare
carbon source Cholinium lysinate (C) -0.3 -2.6 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.3 -1.6 compare
nitrogen source Ammonium chloride (N) -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.3 +1.9 compare
carbon source Myristic (C) +0.3 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +1.9 compare
temperature Growth at 25C +0.4 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.1 compare
carbon source L-Valine (C) +0.6 +5.0 compare
carbon source Crotonic (C) +0.6 +1.9 compare
carbon source L-Valine (C) +0.6 +5.5 compare
nitrogen source Propandiamine (N) +0.7 +3.8 compare
nitrogen source Propandiamine (N) +0.8 +5.6 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +4.0 compare
nitrogen source D-2-Aminobutyric (N) +1.2 +5.2 compare