Fitness data for PP_4753 in Pseudomonas putida KT2440

putative N-methylproline demethylase
SEED: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
no stress control Growth with no stress -0.9 -4.3 compare
nitrogen source Urea (N) -0.7 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.9 compare
stress Growth with Chloride 500 mM -0.5 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.5 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.3 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.5 -2.5 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.7 compare
nitrogen source nitrate (N) -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
pH Growth at pH8 and (C) D-Glucose +0.4 +2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.3 compare
nitrogen source NAG (N); with MOPS +0.5 +1.3 compare
mixed community control Putida_ML5X alone +0.5 +3.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.7 +3.2 compare