Fitness data for PP_4752 in Pseudomonas putida KT2440

putative Xaa-Pro aminopeptidase
SEED: Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.8 -2.6 compare
carbon source carbon source Bisabolene 48.9 mM -0.8 -3.1 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.8 -2.6 compare
pH Growth at pH7 and (C) Trisodium citrate -0.7 -1.3 compare
pH pH 4 -0.7 -2.5 compare
carbon source carbon source D-Glucose 55.5 mM -0.7 -1.9 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.3 compare
no stress control Growth with no stress -0.7 -2.1 compare
pH pH 8 -0.7 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.7 compare
carbon source D-Lysine 10 mM (C) +0.6 +2.6 compare
carbon source L-Phenylalanine 5 mM (C) +0.6 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.6 compare
carbon source Crotonic (C) +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.7 +2.7 compare
stress Growth with Chloride 200 mM; with MOPS +0.8 +2.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.9 +2.3 compare