Fitness data for PP_4750 in Pseudomonas putida KT2440

Amino acid ABC transporter, permease protein
SEED: amino acid ABC transporter, permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.8 compare
carbon source Trisodium citrate (C) -0.5 -1.5 compare
nitrogen source nitrate (N) -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.4 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.6 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Arg +0.4 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.8 compare
nitrogen source DL-3-Aminoisobutyric (N) +0.4 +2.4 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.8 compare
stress R2A with Fusaric 240 ug/mL +0.4 +2.0 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.4 +1.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.0 compare
carbon source Mucic (C) +0.4 +2.3 compare
carbon source Valeric (C) +0.4 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.0 compare
nitrogen source Propiolactam (N) +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.7 compare