Fitness data for PP_4741 in Pseudomonas putida KT2440

Type I restriction enzyme EcoEI M protein
SEED: Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)
KEGG: type I restriction enzyme M protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -2.1 compare
carbon source ferulate (C); with MOPS -0.3 -1.5 compare
carbon source D-Glucose (C); with MOPS -0.3 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.5 compare
pH Growth at pH7 and (C) D-Glucose -0.3 -1.4 compare
temperature Growth at 25C -0.3 -1.1 compare
nitrogen source nitrite (N) +0.3 +2.2 compare
carbon source Tween 20 (C) +0.3 +1.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
carbon source Acetate Carbon Source (20mM) +0.4 +2.5 compare
carbon source butyrate (C) +0.4 +2.1 compare
carbon source Delta-Decalactone (C) +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.0 compare
pH Growth at pH8 and (C) D-Glucose +0.4 +2.8 compare