Fitness data for PP_4738 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: FIG00955877: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -2.8 -3.8 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -2.1 -1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.8 -2.3 compare
pH Growth at pH8 and (C) D-Glucose -1.8 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.8 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -1.8 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.7 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.5 -2.8 compare
pH Growth at pH9 and (C) D-Glucose -1.5 -1.4 compare
pH Growth at pH6 and (C) Trisodium citrate -1.4 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -2.1 compare
pH Growth at pH9 and (C) D-Glucose -1.4 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.4 -2.7 compare
pH pH 4 -1.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.6 compare
pH Growth at pH7 and (C) Trisodium citrate -1.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2 -2.4 compare
nitrogen source nitrate (N) -1.2 -1.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.2 -1.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.2 +2.3 compare