Fitness data for PP_4692 in Pseudomonas putida KT2440

putative aspartate/tyrosine/aromatic aminotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source DL-2-Aminobutyric (N) -1.7 -11.4 compare
nitrogen source DL-2-Aminobutyric (N) -1.7 -9.9 compare
carbon source ferulate (C); with MOPS -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -2.3 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.6 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.4 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.6 compare
carbon source Glucose (C) (20mM) +0.4 +2.5 compare
temperature Growth at 30C +0.4 +2.2 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.4 +2.1 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Tyr +0.4 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Thr +0.4 +3.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
carbon source D-Glucose (C) 5 mM +0.5 +3.6 compare
carbon source 4-Aminobutyric 10 mM (C) +0.6 +3.7 compare
carbon source 5-Aminovaleric 10 mM (C) +0.7 +4.8 compare