Fitness data for PP_4685 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Regulator of competence-specific genes
KEGG: DNA transformation protein and related proteins

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.4 -4.1 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.3 -4.5 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -1.2 -4.9 compare
nitrogen source D-2-Aminobutyric (N) -1.2 -3.1 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.2 -3.8 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.0 -2.8 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -1.0 -4.5 compare
nitrogen source D-2-Aminobutyric (N) -0.9 -3.3 compare
carbon source Delta-Nonalactone (C) -0.9 -3.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -2.9 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.8 -3.1 compare
carbon source 1,4-Butanediol (C) -0.8 -3.1 compare
carbon source Myristic (C) -0.8 -1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.8 -3.5 compare
carbon source 1,3-Hexanediol (C) -0.7 -3.5 compare
reactor_pregrowth Adaptation in M9 media timecourse 1; day 3 -0.7 -3.1 compare
carbon source Nonanoic (C) -0.7 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.9 compare
nitrogen source L-Phenylalanine (N) -0.7 -4.2 compare
carbon source 1,3-Hexanediol (C) -0.7 -2.9 compare