Fitness data for PP_4634 in Pseudomonas putida KT2440

putative hydrolase, alpha/beta fold family
SEED: Hydrolases of the alpha/beta superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -0.8 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.2 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.6 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.7 compare
carbon source 1,3-Butandiol (C) -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.9 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5 -2.2 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.4 -2.0 compare
pH pH 5 -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.3 compare
phage P. put South MOI 10 +0.4 +2.0 compare
nitrogen source nitrate (N) +0.4 +2.4 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.4 +2.7 compare
nitrogen source Ammonium chloride (N) +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +2.5 compare