Fitness data for PP_4628 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C)
KEGG: MioC protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source propionate (C) -4.7 -5.1 compare
carbon source Levulinic Acid (C) -3.9 -5.0 compare
carbon source DL-3-Hydroxyisobutyric (C) -3.8 -5.7 compare
carbon source Levulinic Acid (C) -3.8 -7.0 compare
carbon source DL-3-Hydroxyisobutyric (C) -3.8 -5.1 compare
carbon source Levulinic Acid (C) -3.8 -6.4 compare
carbon source Levulinic Acid (C) -3.6 -4.5 compare
carbon source 2-Methylbutanoic (C) -2.6 -4.4 compare
carbon source 2-Methylbutanoic (C) -2.5 -3.6 compare
carbon source propionate (C) -1.9 -3.7 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.8 -8.7 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.7 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.3 -3.0 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -1.3 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.1 -2.5 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -1.0 -2.8 compare
carbon source Lignin Monomers (C) +1.8 +9.4 compare
carbon source 3-methyl-1-butanol (C) +1.8 +8.6 compare
carbon source 3-methyl-1-butanol (C) +1.9 +12.6 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +3.3 +12.4 compare