Fitness data for PP_4626 in Pseudomonas putida KT2440

holin regulator of murein hydrolases
SEED: Holin-like protein CidA
KEGG: holin-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.2 -1.8 compare
pH pH 5 -1.2 -3.0 compare
pH Growth at pH6 and (C) D-Glucose -1.0 -1.6 compare
no stress control Growth with no stress -1.0 -2.1 compare
phage P. putida Sci small MOI 0.1 -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -1.7 compare
nitrogen source NAG (N); with MOPS -0.6 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.0 compare
pH D-Glucose (C) pH 6.5 -0.6 -2.5 compare
carbon source 2,3-Butanediol (C) -0.6 -1.8 compare
pH pH 6 -0.6 -1.4 compare
carbon source 1,3-Butandiol (C) -0.6 -1.5 compare
temperature Growth at 25C +0.6 +1.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6 +1.4 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.5 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.6 +4.2 compare
nitrogen source nitrate (N) +0.6 +2.2 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.6 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +1.6 compare