Fitness data for PP_4623 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Aconitase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source Valerolactone (C) +0.2 +1.6 compare
nitrogen source Urea (N) +0.2 +1.5 compare
nitrogen source nitrogen source nitrite 1mM +0.2 +1.4 compare
temperature shift Temperature shift 30_to_25 +0.2 +1.7 compare
stress Growth with Chloride 200 mM; with MOPS +0.2 +1.5 compare
carbon source 2-Methylbutanoic (C) +0.2 +1.7 compare
pH Growth at pH6 and (C) Trisodium citrate +0.2 +1.6 compare
carbon source DL-3-Hydroxyisobutyric (C) +0.2 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.8 compare
carbon source D-Glucose (C) +0.3 +1.6 compare
temperature shift Temperature shift 30_to_25 +0.3 +1.9 compare
temperature Growth at 30C +0.3 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.3 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +2.5 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +3.0 compare