Fitness data for PP_4612 in Pseudomonas putida KT2440

putative FecR protein
SEED: Iron siderophore sensor protein
KEGG: transmembrane sensor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 3-methyl-1-butanol (C) -1.0 -6.1 compare
carbon source 3-methyl-1-butanol (C) -0.8 -5.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.7 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5 -2.5 compare
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -0.5 -3.2 compare
nitrogen source Propandiamine (N) -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.3 compare
stress 3-methyl-1-butanol 0.4 vol% -0.5 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -2.7 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -2.4 compare
carbon source ferulate (C); with MOPS -0.4 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -1.5 compare
temperature Growth at 25C -0.4 -1.6 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +2.5 compare
stress R2A with Fusaric 240 ug/mL +0.4 +2.6 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +2.3 compare
reactor_pregrowth Adaptation in M9 media timecourse 3; day 3 +0.4 +2.5 compare
reactor_pregrowth Adaptation in M9 media timecourse 4; day 3 +0.4 +3.0 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. +0.5 +2.3 compare