Fitness data for PP_4592 in Pseudomonas putida KT2440

putative metal dependent hydrolase
SEED: membrane protein, putative
KEGG: phosphoethanolamine transferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.0 -12.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.7 -10.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.7 -11.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -1.0 -7.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.0 -4.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.7 -4.4 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.7 -4.4 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -4.0 compare
carbon source ferulate (C); with MOPS -0.5 -2.4 compare
pH pH 4 -0.4 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -2.0 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +2.6 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.4 +2.6 compare
reactor_pregrowth Adaptation in M9 media timecourse 3; day 3 +0.4 +3.3 compare
nitrogen source L-Leucine (N) +0.4 +3.6 compare
nitrogen source L-Leucine (N) +0.4 +3.6 compare
carbon source Valerolactone (C) +0.4 +2.9 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. +0.4 +3.3 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.5 +4.0 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.6 +3.5 compare