Fitness data for PP_4579 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Cyn operon transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source L-pyroglutamic (N) -3.3 -9.2 compare
nitrogen source L-pyroglutamic (N) -2.7 -7.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -3.4 compare
carbon source L-Glutamic (C) -1.2 -5.8 compare
carbon source L-Glutamic (C) -0.8 -4.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -1.8 compare
temperature Growth at 25C -0.7 -1.6 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.6 -2.6 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.6 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.7 compare
carbon source L-Glutamine (C) -0.5 -3.3 compare
nitrogen source spermidine (N) +0.6 +4.0 compare
pH Growth at pH6 and (C) Trisodium citrate +0.6 +1.8 compare
pH pH 8 +0.6 +1.7 compare
pH pH 6 +0.6 +1.7 compare
nitrogen source spermidine (N) +0.6 +4.2 compare
nitrogen source NAG (N); with MOPS +0.7 +1.6 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.7 +2.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.8 +2.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +1.8 +10.8 compare