Fitness data for PP_4577 in Pseudomonas putida KT2440

UPF0271 protein PP_4577
SEED: Lactam utilization protein LamB
KEGG: UPF0271 protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source L-pyroglutamic (N) -3.8 -9.0 compare
nitrogen source L-pyroglutamic (N) -3.7 -9.0 compare
carbon source L-Glutamic (C) -1.4 -4.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.4 -4.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -3.1 compare
carbon source L-Lysine 10 mM (C) -1.1 -3.5 compare
micoeukaryotes C.elegans, mixed culture-1 -1.1 -3.9 compare
carbon source L-Glutamine (C) -1.1 -4.4 compare
nitrogen source nitrite (N) -1.1 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.1 -2.8 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -1.1 -5.2 compare
phage P. putida Sci small MOI 0.1 -1.0 -2.4 compare
nitrogen source NAG (N); with MOPS -1.0 -1.9 compare
carbon source L-Lysine (C) -0.9 -5.3 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.9 -3.5 compare
carbon source L-Glutamic (C) -0.9 -3.7 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.8 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.2 compare
carbon source Tween 20 (C) -0.8 -1.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +2.0 +12.8 compare