Fitness data for PP_4482 in Pseudomonas putida KT2440

Transcriptional regulator, AraC family
SEED: Arginine pathway regulatory protein ArgR, repressor of arg regulon

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
carbon source 3-methyl-1-butanol (C) -3.9 -5.8 compare
carbon source L-Lysine (C) -3.7 -5.3 compare
nitrogen source L-Arginine (N) -3.5 -6.7 compare
carbon source L-Arginine (C) -3.5 -6.8 compare
carbon source L-Lysine 10 mM (C) -3.4 -4.6 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -3.3 -5.2 compare
carbon source 3-methyl-1-butanol (C) -3.2 -5.7 compare
pH Growth at pH7 and (C) Trisodium citrate -3.2 -3.6 compare
carbon source 4-Methyl-2-oxopentanoic (C) -2.9 -3.4 compare
temperature shift Temperature shift 10_to_25; with MOPS -2.8 -4.1 compare
nitrogen source L-Arginine (N) -2.7 -7.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -2.7 -3.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.7 -4.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.6 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.5 -3.2 compare
carbon source L-Isoleucine (C) -2.5 -5.2 compare
nitrogen source Urea (N) -2.4 -2.3 compare
stress 3-methyl-1-butanol 0.4 vol% -2.3 -4.2 compare
carbon source Myristic (C) -2.2 -2.2 compare
pH pH 4 -2.1 -5.1 compare