Fitness data for PP_4461 in Pseudomonas putida KT2440

Major facilitator family transporter
SEED: L-Proline/Glycine betaine transporter ProP

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
pH pH 7 -0.7 -2.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7 -2.6 compare
pH pH 6 -0.6 -2.8 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.9 compare
carbon source carbon source D-Glucose 55.5 mM -0.6 -2.1 compare
nitrogen source no extra (N); with MOPS -0.5 -2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.5 -2.3 compare
temperature shift Temperature shift 30_to_21 -0.5 -2.8 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.5 +2.6 compare
carbon source 4-Aminobutyric 10 mM (C) +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.1 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.3 compare
nitrogen source Propandiamine (N) +0.5 +2.2 compare
nitrogen source NAG (N); with MOPS +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.6 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +3.0 compare
carbon source Crotonic (C) +0.7 +2.0 compare
phage P. putida PUT 7 MOI 1 +0.8 +5.1 compare
phage P. putida Missley MOI 0.1 +0.9 +4.9 compare