Fitness data for PP_4456 in Pseudomonas putida KT2440

opine oxidase subunit A
SEED: D-nopaline/octopine oxidase subunit A @ Opine oxidase subunit A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3 -2.0 compare
carbon source L-Lysine (C) -0.3 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.5 compare
nitrogen source D-2-Aminobutyric (N) -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.3 -2.1 compare
temperature Growth at 25C -0.3 -1.5 compare
phage P. putida PUT10 MOI 0.1 -0.3 -2.1 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.3 -2.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -1.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.2 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.3 +1.9 compare
temperature Growth at 25C; with MOPS +0.4 +2.2 compare
phage P. putida Sci Big MOI 0.1 +0.4 +2.4 compare
phage P. putida Missley MOI 0.1 +0.6 +4.4 compare
phage P. putida PUT 7 MOI 1 +0.7 +5.2 compare