Fitness data for PP_4444 in Pseudomonas putida KT2440

transposase
SEED: Mobile element protein
KEGG: transposase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.1 -2.3 compare
pH Growth at pH7 and (C) Trisodium citrate -0.9 -1.2 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.9 -3.7 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.9 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -0.8 -2.0 compare
nitrogen source NAG (N); with MOPS -0.8 -1.1 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.8 -2.1 compare
pH pH 6 -0.8 -2.3 compare
pH Growth at pH9 and (C) Trisodium citrate -0.8 -1.3 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.8 -2.8 compare
phage P. putida Sci Big MOI 0.1 +0.7 +1.6 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.7 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +1.6 compare
stress R2A with Fusaric 480 ug/mL +0.8 +4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +2.7 compare
carbon source butyrate (C) +0.8 +2.8 compare
stress R2A with Fusaric 240 ug/mL +0.9 +2.4 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.9 +2.7 compare
phage P. putida PUT 7 MOI 1 +1.0 +2.3 compare