Fitness data for PP_4430 in Pseudomonas putida KT2440

putative threonine dehydratase
SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
KEGG: threonine dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
pH Growth at pH9 and (C) Trisodium citrate -0.4 -2.3 compare
stress Growth with Chloride 200 mM -0.4 -2.1 compare
nitrogen source Ammonium chloride (N) -0.3 -2.1 compare
pH pH 9 -0.3 -1.9 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.3 -1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.3 -2.0 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.6 compare
carbon source D-Glucose (C); with MOPS -0.3 -1.5 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.2 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3 +2.0 compare
stress R2A with Fusaric 240 ug/mL +0.3 +1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.8 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +2.2 compare
carbon source Valerolactone (C) +0.4 +3.0 compare
phage P. putida PUT 7 MOI 1 +0.6 +4.0 compare
phage P. putida Missley MOI 0.1 +0.6 +4.3 compare