Fitness data for PP_4428 in Pseudomonas putida KT2440

Amino acid ABC transporter, periplasmic amino acid-binding protein
SEED: amino acid ABC transporter, periplasmic amino acid-binding protein
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source carbon source 4-vinylphenol 0.1 mM -0.8 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.0 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.4 -2.1 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.4 -1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.4 -1.7 compare
carbon source carbon source Bisabolol 45 mM -0.4 -2.0 compare
carbon source Nonanoic (C) -0.4 -2.6 compare
no stress control Growth with no stress -0.4 -1.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.3 -1.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +1.7 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.4 +2.1 compare
carbon source Valerolactone (C) +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.2 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.4 +2.4 compare
nitrogen source Ammonium chloride (N); with MOPS +0.4 +2.6 compare
nitrogen source Propandiamine (N) +0.5 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.3 compare
phage P. putida Missley MOI 0.1 +0.6 +2.9 compare
phage P. putida Sci small MOI 0.1 +0.7 +3.5 compare
phage P. putida PUT 7 MOI 1 +0.7 +4.4 compare