Fitness data for PP_4379 in Pseudomonas putida KT2440

Beta-ketoacyl-acyl-carrier-protein synthase I
KEGG: 3-oxoacyl-[acyl-carrier-protein] synthase III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.3 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.8 -4.6 compare
temperature shift Temperature shift 10_to_25; with MOPS -3.5 -2.4 compare
micoeukaryotes C.elegans, mixed culture-1 -3.5 -6.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -3.4 -6.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.3 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.2 -2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -3.0 -5.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.0 -4.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -2.8 -4.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -2.8 -5.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.8 -3.7 compare
nitrogen source NAG (N); with MOPS -2.7 -4.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.6 -3.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -2.6 -4.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.6 -4.6 compare
temperature shift Temperature shift 10_to_25 -2.6 -4.2 compare
phage moi 100 Time6-phageFRS -2.4 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.4 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.4 -4.2 compare